6T1I
Crystal structure of MLLT1 (ENL) YEATS domain in complexed with piperazine-urea derivative 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 48.936, 48.936, 132.776 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.920 - 1.800 |
R-factor | 0.2065 |
Rwork | 0.205 |
R-free | 0.23220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hq0 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.332 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.940 | 48.940 | 1.860 |
High resolution limit [Å] | 1.800 | 6.970 | 1.800 |
Rmerge | 0.071 | 0.047 | 0.806 |
Rmeas | 0.078 | 0.051 | 0.891 |
Rpim | 0.025 | 0.017 | 0.278 |
Number of reflections | 15758 | 333 | 1499 |
<I/σ(I)> | 13.7 | 2.2 | |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 9.6 | 8.4 | 9.9 |
CC(1/2) | 0.999 | 0.998 | 0.891 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 25% PEG 3350, 0.2 M sodium chloride, 0.1 M bis-tris pH 6.5 |