Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6T0D

Crystal structure of YTHDC1 with fragment 27 (DHU_DC1_256)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-24
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.975, 103.991, 42.026
Unit cell angles90.00, 105.39, 90.00
Refinement procedure
Resolution40.520 - 1.430
R-factor0.2043
Rwork0.203
R-free0.23280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4r3h
RMSD bond length0.005
RMSD bond angle0.797
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.6001.510
High resolution limit [Å]1.4301.430
Number of reflections591039114
<I/σ(I)>9.3
Completeness [%]96.4
Redundancy3.52
CC(1/2)0.9970.592
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG3350, 0.2M Ammonium Sulphate, 0.1M bis-tris, pH 6.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon