Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SZR

Crystal structure of YTHDC1 with fragment 9 (DHU_DC1_107)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-02-18
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.508, 103.290, 41.947
Unit cell angles90.00, 105.40, 90.00
Refinement procedure
Resolution40.440 - 1.640
R-factor0.1947
Rwork0.192
R-free0.23990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4r3h
RMSD bond length0.006
RMSD bond angle0.759
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.6001.740
High resolution limit [Å]1.6401.640
Number of reflections393676195
<I/σ(I)>8.09
Completeness [%]99.1
Redundancy3.42
CC(1/2)0.9960.405
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG3350, 0.2M Ammonium Sulphate, 0.1M bis-tris, pH 6.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon