6SXV
GH51 a-l-arabinofuranosidase soaked with aziridine inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-18 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.987 |
Spacegroup name | H 3 |
Unit cell lengths | 178.994, 178.994, 100.893 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.850 - 1.402 |
Rwork | 0.170 |
R-free | 0.17840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1pz3 |
RMSD bond length | 0.019 |
RMSD bond angle | 2.169 |
Data reduction software | XDS (Aug. 8, 2018) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.850 | 1.440 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.077 | 0.613 |
Number of reflections | 235421 | 16547 |
<I/σ(I)> | 10.8 | 1.5 |
Completeness [%] | 99.5 | 94.5 |
Redundancy | 6.2 | 5.8 |
CC(1/2) | 0.997 | 0.780 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 2:1 protein:well solution. 0.1 M pH 7.5 Tris-HCl buffer, 18% PEG3350, 0.7 M NH4F, 5% 2-propanol |