6SX8
Mopeia Virus Exonuclease domain complexed with Manganese
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 173 |
Detector technology | PIXEL |
Collection date | 2018-05-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97857 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 45.537, 38.014, 137.230 |
Unit cell angles | 90.00, 92.94, 90.00 |
Refinement procedure
Resolution | 38.820 - 1.800 |
R-factor | 0.2129 |
Rwork | 0.211 |
R-free | 0.25440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ls4 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 68.520 | 68.520 | 1.880 |
High resolution limit [Å] | 1.790 | 5.650 | 1.790 |
Rmerge | 0.041 | 0.027 | 0.355 |
Rmeas | 0.048 | 0.032 | 0.416 |
Rpim | 0.025 | 0.016 | 0.214 |
Total number of observations | 163593 | 5035 | 23941 |
Number of reflections | 44791 | 1505 | 6503 |
<I/σ(I)> | 14 | 37.9 | 2.6 |
Completeness [%] | 99.4 | 98.5 | 99.4 |
Redundancy | 3.7 | 3.3 | 3.7 |
CC(1/2) | 0.999 | 0.999 | 0.975 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M MES, PEG 8000 manganese |