6SLN
Structure of the RagAB peptide transporter
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-22 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.917 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 129.781, 142.734, 250.048 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 123.960 - 2.610 |
R-factor | 0.2096 |
Rwork | 0.207 |
R-free | 0.26420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6sli |
RMSD bond length | 0.008 |
RMSD bond angle | 1.025 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 142.700 | 2.650 |
High resolution limit [Å] | 2.610 | 2.610 |
Rmeas | 0.278 | 2.079 |
Rpim | 0.102 | 0.752 |
Number of reflections | 141223 | 6762 |
<I/σ(I)> | 5.6 | 1 |
Completeness [%] | 99.9 | |
Redundancy | 7.3 | |
CC(1/2) | 0.995 | 0.530 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4.5 | 293 | 15% PEG1000 0.05 M Li-sulphate 0.05 M Na-phosphate monobasic 0.08 M Na-citrate |