6SI4
p53 cancer mutant Y220S in complex with small-molecule stabilizer PK9323
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06SA |
| Synchrotron site | SLS |
| Beamline | X06SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-09-03 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.999998 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 65.220, 71.193, 105.159 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.295 - 1.800 |
| R-factor | 0.1919 |
| Rwork | 0.190 |
| R-free | 0.22470 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 2j1x |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.780 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.090 | 1.840 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.089 | 0.541 |
| Rmeas | 0.101 | 0.615 |
| Rpim | 0.048 | 0.286 |
| Total number of observations | 198228 | |
| Number of reflections | 45643 | 2709 |
| <I/σ(I)> | 8.9 | 2.5 |
| Completeness [%] | 99.1 | 99.9 |
| Redundancy | 4.3 | 4.4 |
| CC(1/2) | 0.996 | 0.873 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | Protein solution: 6 mg/ml protein in 25 mM sodium phosphate, ph 7.2, 150 mm KCl, 5 mm DTT. Reservoir buffer: 100 mm HEPES, pH 7.2, 19% (w/v) polyethylene glycol 4000, 5 mm DTT, 2 mM PK9323. |






