6SG8
Structure of Sosuga virus receptor binding protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 77 |
Detector technology | PIXEL |
Collection date | 2018-04-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 75.700, 84.040, 81.690 |
Unit cell angles | 90.00, 112.85, 90.00 |
Refinement procedure
Resolution | 51.600 - 2.500 |
R-factor | 0.1958 |
Rwork | 0.194 |
R-free | 0.23140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5b2c |
RMSD bond length | 0.003 |
RMSD bond angle | 0.653 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_3488) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.600 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.075 | 0.941 |
Rmeas | 0.081 | 1.021 |
Rpim | 0.031 | 0.392 |
Number of reflections | 32731 | 32699 |
<I/σ(I)> | 13.5 | 1.5 |
Completeness [%] | 99.7 | 98.9 |
Redundancy | 6.7 | 6.5 |
CC(1/2) | 1.000 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.2 M magnesium acetate tetrahydrate, 0.1 M sodium cacodylate pH 6.5, 20% PEG 8000 |