6S9V
Crystal structure of sucrose 6F-phosphate phosphorylase from Thermoanaerobacter thermosaccharolyticum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-19 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.332, 83.690, 147.401 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.666 - 1.830 |
R-factor | 0.157 |
Rwork | 0.156 |
R-free | 0.18410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1r7a |
Data reduction software | XDS |
Data scaling software | Aimless (0.6.3) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14rc1_3161) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.370 | 45.370 | 1.860 |
High resolution limit [Å] | 1.830 | 9.850 | 1.830 |
Rmerge | 0.073 | 0.044 | 0.671 |
Rmeas | 0.081 | 0.049 | 0.739 |
Rpim | 0.034 | 0.021 | 0.304 |
Total number of observations | 461327 | 2855 | 24229 |
Number of reflections | 86925 | 609 | 4407 |
<I/σ(I)> | 12.7 | 27.3 | 2.3 |
Completeness [%] | 99.8 | 96.1 | 99.8 |
Redundancy | 5.3 | 4.7 | 5.5 |
CC(1/2) | 0.998 | 0.997 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 26% PEG 3350, 100 mM ammonium sulphate, 100 mM Bis-Tris propane buffer |