6S63
Dark-adapted structure of Archaerhodopsin-3 obtained from LCP crystals using a thin-film sandwich at room temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2017-03-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96862 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.910, 48.351, 105.364 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.680 - 1.850 |
R-factor | 0.1756 |
Rwork | 0.175 |
R-free | 0.19170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1uaz |
RMSD bond length | 0.004 |
RMSD bond angle | 0.951 |
Data reduction software | DIALS (3.25) |
Data scaling software | Aimless |
Phasing software | PHASER (2.7.17) |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 105.360 | 1.880 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.401 | 0.138 |
Rpim | 0.126 | 0.623 |
Number of reflections | 18417 | 876 |
<I/σ(I)> | 6.6 | 1.3 |
Completeness [%] | 89.0 | 88.13 |
Redundancy | 8.5 | |
CC(1/2) | 0.995 | 0.316 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5.5 | 293 | 100mM MES pH 5.5, 33% PEG 600, 150mM Na chloride, 150mM Ca chloride |