6S3O
Crystal structure of helicase Pif1 from Thermus oshimai in complex with ssDNA (dT)18 and ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.012, 64.489, 144.829 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.240 - 1.974 |
R-factor | 0.1885 |
Rwork | 0.187 |
R-free | 0.22330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ftd |
RMSD bond length | 0.005 |
RMSD bond angle | 0.718 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14rc1_3177: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.240 | 2.045 |
High resolution limit [Å] | 1.974 | 1.974 |
Rmerge | 0.124 | 0.826 |
Rmeas | 0.135 | 0.901 |
Rpim | 0.051 | 0.355 |
Number of reflections | 35963 | 3642 |
<I/σ(I)> | 14.81 | 2.32 |
Completeness [%] | 87.7 | 90.28 |
Redundancy | 7 | 5.9 |
CC(1/2) | 0.999 | 0.938 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | Tris-HCl 0.1M NaF 0.03M NaBr 0.03M NaI 0.03M MES 0.03M PEG 4K 10% Glycerol 20% |