6S3H
Crystal structure of helicase Pif1 from Thermus oshimai in complex with ADP-AlF4 and (dT)7ds11bp
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9779 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.682, 200.130, 53.955 |
Unit cell angles | 90.00, 93.44, 90.00 |
Refinement procedure
Resolution | 29.510 - 2.060 |
R-factor | 0.201 |
Rwork | 0.201 |
R-free | 0.22700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ftd |
RMSD bond length | 0.010 |
RMSD bond angle | 1.060 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.860 | 2.131 |
High resolution limit [Å] | 2.057 | 2.057 |
Rmerge | 0.068 | 0.377 |
Rmeas | 0.081 | 0.472 |
Rpim | 0.034 | 0.279 |
Number of reflections | 66828 | 5458 |
<I/σ(I)> | 10.71 | 2.01 |
Completeness [%] | 97.0 | 79.35 |
Redundancy | 3.3 | 2.6 |
CC(1/2) | 0.996 | 0.848 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Sodium Hepes-MOPS 0.1M CaCl2 0.03M MgCl2 0.03M PEG 8000 10% Ethylene glycol 20% |