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6S3D

Structure of D25 Fab in complex with scaffold S0_2.126

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-27
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9677
Spacegroup nameP 21 21 21
Unit cell lengths126.272, 126.977, 156.091
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.086 - 3.000
R-factor0.2702
Rwork0.269
R-free0.29170
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4jha
RMSD bond length0.004
RMSD bond angle0.793
Data reduction softwareXDS (BUILT=20190315)
Data scaling softwareXSCALE (BUILT=20190315)
Phasing softwarePHASER (2.8.1)
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.08649.0863.080
High resolution limit [Å]3.00013.4103.000
Rmerge0.156
Rmeas0.168
Number of reflections9699210487183
<I/σ(I)>8.6928.981.38
Completeness [%]99.796.799.3
Redundancy7.238
CC(1/2)0.9980.810
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5291.1510% (w/v) PEG 8000, 100 mM HEPES pH 7.5, 200 mM Calcium acetate

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