6S3B
Ligand binding domain of the P. putida receptor PcaY_PP in complex with benzoate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-12-05 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.979 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 45.390, 69.219, 92.333 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.170 - 1.950 |
| R-factor | 0.178 |
| Rwork | 0.176 |
| R-free | 0.21580 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6s18 |
| RMSD bond length | 0.017 |
| RMSD bond angle | 1.401 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | REFMAC |
| Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.170 | 2.020 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Rmerge | 0.082 | 1.110 |
| Rmeas | 0.092 | 1.230 |
| Rpim | 0.040 | 0.510 |
| Number of reflections | 20630 | 2160 |
| <I/σ(I)> | 12.17 | 1.5 |
| Completeness [%] | 94.1 | 99.91 |
| Redundancy | 5.2 | 5.5 |
| CC(1/2) | 0.997 | 0.620 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | COUNTER-DIFFUSION | 6.5 | 293 | 30% PEG 8K, 0.1M Na Acetate, 0.1M Na-Cacodylate pH 6.50 |






