6RZF
Galectin-3C in complex with ortho-fluoroaryltriazole galactopyranosyl 1-thio-D-glucopyranoside derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.929 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.271, 57.623, 62.011 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.006 - 1.016 |
R-factor | 0.1371 |
Rwork | 0.136 |
R-free | 0.15860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zsl |
RMSD bond length | 0.011 |
RMSD bond angle | 1.213 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.010 | 1.053 |
High resolution limit [Å] | 1.016 | 1.016 |
Rmerge | 0.067 | 2.040 |
Rmeas | 0.070 | 2.150 |
Rpim | 0.020 | 0.674 |
Number of reflections | 66460 | 6016 |
<I/σ(I)> | 14.93 | |
Completeness [%] | 98.0 | |
Redundancy | 11.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 20% PEG 4000, 0.1 M Tris/HCl pH 7.5,, 0.4 M NaSCN, 7.9 mM beta-mercaptoethanol |