6RYJ
structure of conglutinin carbohydrate recognition domain with ethylene glycol bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX14.2 |
Synchrotron site | SRS |
Beamline | PX14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-03-04 |
Detector | ADSC QUANTUM 4r |
Wavelength(s) | 0.985 |
Spacegroup name | P 43 |
Unit cell lengths | 50.822, 50.822, 52.837 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.640 - 1.250 |
R-factor | 0.182 |
Rwork | 0.181 |
R-free | 0.20300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 1pw9 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.682 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.1.4) |
Phasing software | AMoRE |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.868 | 52.868 | 1.290 |
High resolution limit [Å] | 1.250 | 3.660 | 1.250 |
Rmerge | 0.034 | 0.027 | 0.199 |
Rmeas | 0.039 | 0.030 | 0.269 |
Total number of observations | 348475 | ||
Number of reflections | 35164 | 1553 | 2367 |
<I/σ(I)> | 27.5 | 21.1 | 3.5 |
Completeness [%] | 94.3 | 100 | 66.9 |
Redundancy | 9.9 | 13.5 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 2.5 M ammonium sulfate, 0.1 M tris |