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6RMD

Structure of ATP bound Plasmodium falciparum IMP-nucleotidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2015-12-15
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9670
Spacegroup nameP 65 2 2
Unit cell lengths210.690, 210.690, 106.230
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.400 - 2.800
R-factor0.2025
Rwork0.200
R-free0.24540
Structure solution methodSAD
RMSD bond length0.005
RMSD bond angle0.724
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.17.1_3660: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.4302.610
High resolution limit [Å]2.5002.500
Number of reflections483135874
<I/σ(I)>18.4
Completeness [%]99.9
Redundancy12.6
CC(1/2)1.0000.400
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2920.1 M sodium malonate pH 5.0, 12% (w/v) PEG 3,350

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PDB entries from 2024-05-15

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