6RM8
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.03320 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.340, 75.460, 154.440 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.526 - 1.950 |
R-factor | 0.2009 |
Rwork | 0.200 |
R-free | 0.21780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6fa5 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.526 | 42.526 | 2.050 |
High resolution limit [Å] | 1.950 | 50.000 | 1.950 |
Rmerge | 0.074 | 1.335 | |
Rmeas | 0.078 | 1.407 | |
Total number of observations | 520880 | ||
Number of reflections | 55604 | 3 | 7614 |
<I/σ(I)> | 15.97 | 2.08 | |
Completeness [%] | 100.0 | 75 | 99.9 |
Redundancy | 9.368 | 2 | 9.753 |
CC(1/2) | 0.999 | 0.810 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 100 mM MES pH 6.5, 350 mM calcium acetate, 19% (w/v) PEG4000 |