6RG9
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-23 |
Detector | MARRESEARCH |
Wavelength(s) | 0.872600 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 63.253, 75.003, 119.269 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.127 - 2.080 |
R-factor | 0.2356 |
Rwork | 0.235 |
R-free | 0.25230 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.130 | 35.130 | 2.140 |
High resolution limit [Å] | 2.080 | 9.070 | 2.080 |
Rmerge | 0.085 | 0.038 | 0.789 |
Rmeas | 0.091 | 0.041 | 0.849 |
Rpim | 0.034 | 0.016 | 0.311 |
Total number of observations | 127706 | 1479 | 9851 |
Number of reflections | 17416 | 239 | 1335 |
<I/σ(I)> | 14.9 | 45.9 | 2.2 |
Completeness [%] | 100.0 | 96.1 | 100 |
Redundancy | 7.3 | 6.2 | 7.4 |
CC(1/2) | 0.999 | 0.998 | 0.910 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5 | 291.15 | 30 mM NaBr, 220 mM Kcitrate, glycerol 6%, 15-16% w/v PEG400 |