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6RBP

Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an adenine derivative

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
Collection date2008-09-02
DetectorADSC QUANTUM 315r
Wavelength(s)0.97921
Spacegroup nameI 2 2 2
Unit cell lengths62.970, 74.670, 118.880
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.650 - 2.473
R-factor0.2143
Rwork0.212
R-free0.23660
Data reduction softwareXDS
Data scaling softwareAimless (0.7.1)
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]55.65055.6502.570
High resolution limit [Å]2.4708.9102.470
Rmerge0.1030.0330.932
Rmeas0.1200.0401.081
Rpim0.0610.0220.541
Total number of observations389848324519
Number of reflections103752541168
<I/σ(I)>9.633.31.5
Completeness [%]99.898.299.9
Redundancy3.83.33.9
CC(1/2)0.9950.9900.826
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION5291.1530 mM NaBr, 220 mM Kcitrate, glycerol 6%, 15-16% w/v PEG400

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