6RA2
Structural basis for recognition and ring-cleavage of the Pseudomonas quinolone signal (PQS) by AqDC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-15 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.97625 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 96.816, 96.816, 189.837 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.907 - 2.300 |
R-factor | 0.1884 |
Rwork | 0.185 |
R-free | 0.24820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wj3 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.867 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.910 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.062 | 0.200 |
Number of reflections | 40361 | 3990 |
<I/σ(I)> | 29.82 | |
Completeness [%] | 99.3 | |
Redundancy | 7.4 | |
CC(1/2) | 0.998 | 0.984 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 0.10 to 0.15 M magnesium chloride, 0.1 M sodium chloride, 0.1 M MES pH 6.5 and 30 to 40 % PEG 400 at 12C. |