6R2C
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD after soaking with succinylphosphonate phosphonoethyl ester (PESP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97895 |
Spacegroup name | P 1 |
Unit cell lengths | 81.390, 83.960, 160.680 |
Unit cell angles | 99.54, 98.78, 100.89 |
Refinement procedure
Resolution | 21.070 - 2.090 |
R-factor | 0.233 |
Rwork | 0.232 |
R-free | 0.24600 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 2yic |
RMSD bond length | 0.009 |
RMSD bond angle | 0.940 |
Data reduction software | XDS |
Data scaling software | autoPROC |
Phasing software | REFMAC |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 78.480 | 2.120 |
High resolution limit [Å] | 2.090 | 2.090 |
Rmerge | 0.070 | 0.565 |
Rpim | 0.048 | 0.399 |
Number of reflections | 233909 | 11533 |
<I/σ(I)> | 10 | 2.2 |
Completeness [%] | 97.4 | 96.4 |
Redundancy | 2.9 | 2.8 |
CC(1/2) | 0.997 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 60% MPD, 22.5 mM Na acetate |