6R0R
Getah virus macro domain in complex with ADPr covalently bond to Cys34
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-31 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.98005 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 64.011, 46.801, 51.004 |
Unit cell angles | 90.00, 104.16, 90.00 |
Refinement procedure
Resolution | 37.370 - 1.450 |
R-factor | 0.17101 |
Rwork | 0.169 |
R-free | 0.19667 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6qzu |
RMSD bond length | 0.009 |
RMSD bond angle | 1.583 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.370 | 1.470 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.043 | 0.749 |
Rmeas | 0.051 | 0.895 |
Rpim | 0.027 | 0.484 |
Number of reflections | 26026 | 1293 |
<I/σ(I)> | 20.6 | 2.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.6 | 6.5 |
CC(1/2) | 0.999 | 0.775 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.9 | 293 | Imidazole-Malate pH 5.9, 38% PEG 4K, 3 mM ADPr, 3 mM Aspartic acid |