6QV2
Structure of ATPgS-bound outward-facing TM287/288 in complex with nanobody Nb_TM#2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-15 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 |
Unit cell lengths | 88.600, 113.070, 126.890 |
Unit cell angles | 83.18, 73.00, 67.37 |
Refinement procedure
Resolution | 32.590 - 4.230 |
R-factor | 0.307 |
Rwork | 0.306 |
R-free | 0.33000 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.900 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.590 | 32.590 | 4.320 |
High resolution limit [Å] | 4.220 | 18.850 | 4.220 |
Rmerge | 0.052 | 0.010 | 0.351 |
Rmeas | 0.061 | 0.012 | 0.410 |
Number of reflections | 18010 | 320 | 48 |
<I/σ(I)> | 16.12 | 117.77 | 3.25 |
Completeness [%] | 57.4 | 92.8 | 2.1 |
Redundancy | 3.533 | 3.734 | 3.583 |
CC(1/2) | 1.000 | 1.000 | 0.838 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1M TRIS, 0.1M NaCl, 30% (v/v) PEG 400 |