6QRL
Crystal structure of ShkA _Rec1 in complex with c-di-GMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00004 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 55.110, 55.110, 179.661 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 1.840 |
R-factor | 0.2089 |
Rwork | 0.207 |
R-free | 0.23970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6qrj |
RMSD bond length | 0.009 |
RMSD bond angle | 1.677 |
Data reduction software | XDS |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.900 |
High resolution limit [Å] | 1.840 | 1.840 |
Rmerge | 0.108 | 5.180 |
Rpim | 0.108 | 5.180 |
Number of reflections | 28149 | |
<I/σ(I)> | 18.18 | |
Completeness [%] | 94.5 | |
Redundancy | 19.2 | |
CC(1/2) | 1.000 | 0.740 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 0.2 M Ammonium sulfate, 0.1 M Bis-Tris pH 6.5 and 25% w/v PEG 3350 |