6QQ2
Crystal structure of nitrite bound Y323F mutant of haem-Cu containing nitrite reductase from Ralstonia pickettii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | I 21 3 |
Unit cell lengths | 180.975, 180.975, 180.975 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 73.000 - 2.600 |
R-factor | 0.15379 |
Rwork | 0.152 |
R-free | 0.18876 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.740 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.880 | 2.720 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.138 | 0.634 |
Rpim | 0.104 | 0.496 |
Number of reflections | 27909 | 3550 |
<I/σ(I)> | 5.5 | 1.8 |
Completeness [%] | 92.9 | 97 |
Redundancy | 2.9 | 2.8 |
CC(1/2) | 0.973 | 0.548 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 284 | 0.1M HEPES (pH7.5), 20% PEG 3350, 0.2 M Sodium citrate |