6QPO
Adenovirus species D serotype 49 Fiber-Knob KO1 mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-27 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97628 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 105.170, 55.990, 116.030 |
Unit cell angles | 90.00, 112.47, 90.00 |
Refinement procedure
Resolution | 57.060 - 2.450 |
R-factor | 0.19577 |
Rwork | 0.193 |
R-free | 0.25845 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1knb |
RMSD bond length | 0.012 |
RMSD bond angle | 2.002 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.070 | 2.510 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.097 | 1.274 |
Number of reflections | 45958 | 3349 |
<I/σ(I)> | 9.2 | 1.2 |
Completeness [%] | 99.3 | 99.3 |
Redundancy | 3.7 | 3.7 |
CC(1/2) | 0.994 | 0.491 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | Molecular Dimensions, PACT Pemier Screen, condition D05 (0.1 M MMT [Malic acid, MES, Tris], pH 8.0, 25 % w/v PEG 1500) |