6QO9
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis soaked with manganese ions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.529, 61.231, 95.836 |
Unit cell angles | 90.00, 106.48, 90.00 |
Refinement procedure
Resolution | 28.760 - 1.299 |
R-factor | 0.137 |
Rwork | 0.136 |
R-free | 0.15900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6qo5 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.209 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.760 | 1.350 |
High resolution limit [Å] | 1.299 | 1.300 |
Rmerge | 0.048 | 0.532 |
Rmeas | 0.057 | 0.632 |
Rpim | 0.031 | 0.338 |
Number of reflections | 155351 | 15233 |
<I/σ(I)> | 14.9 | 2.16 |
Completeness [%] | 99.0 | 97.65 |
Redundancy | 3.3 | 3.3 |
CC(1/2) | 0.999 | 0.796 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | 1.8 - 2.0 M ammonium sulphate, 0.1 M Bis-Tris methane pH 6.5 |