6QIX
The crystal structure of Trichuris muris p43
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-04 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.92 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.682, 164.834, 61.169 |
Unit cell angles | 90.00, 110.37, 90.00 |
Refinement procedure
Resolution | 57.340 - 1.650 |
R-factor | 0.1523 |
Rwork | 0.150 |
R-free | 0.18870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Inhouse |
RMSD bond length | 0.013 |
RMSD bond angle | 1.194 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX (dev_3304) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.340 | 1.709 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.127 | 1.953 |
Rmeas | 0.135 | 2.078 |
Rpim | 0.045 | 0.700 |
Number of reflections | 103460 | 9969 |
<I/σ(I)> | 9.57 | 1.06 |
Completeness [%] | 97.7 | 94.26 |
Redundancy | 8.7 | 8.7 |
CC(1/2) | 0.998 | 0.528 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.9 | 277 | 0.1 M Carboxylic acids 0.1 M Buffer System 3 8.5 50 % v/v Precipitant Mix 1 Morpheus G9 Molecular Dimensions Precipitant Mix 1 P500MME_P20K 40% v/v PEG 500* MME; 20 % w/v PEG 20000, Buffer System 1 1.0M 6.5 Imidazole; MES monohydrate (acid), Carboxylic acids 0.2M Sodium formate; 0.2M Ammonium acetate; 0.2M Sodium citrate tribasic dihydrate; 0.2M Sodium potassium tartrate tetrahydrate; 0.2M Sodium oxamate |