Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QF2

X-Ray structure of Thermolysin crystallized on a silicon chip

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-06
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 61 2 2
Unit cell lengths92.667, 92.667, 128.311
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.334 - 1.733
R-factor0.1297
Rwork0.128
R-free0.16110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2tlx
RMSD bond length0.006
RMSD bond angle0.841
Data reduction softwareXDS
Data scaling softwareAimless (0.5.8)
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1-2155_9999)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.3341.770
High resolution limit [Å]1.7331.733
Rmerge0.1680.976
Rmeas0.1751.013
Rpim0.0480.266
Number of reflections345271852
<I/σ(I)>11.43.1
Completeness [%]100.0100
Redundancy13.213.6
CC(1/2)0.9950.810
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52950.1M MES-NaOH pH 6.5, 10mM calcium chloride, 25% PEG 2000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon