Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QDG

Leishmania major N-myristoyltransferase in complex with quinazoline inhibitor IMP-0000169

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2012-10-21
DetectorADSC QUANTUM 315
Wavelength(s)0.9795
Spacegroup nameP 1 21 1
Unit cell lengths48.598, 91.202, 53.344
Unit cell angles90.00, 113.96, 90.00
Refinement procedure
Resolution48.750 - 1.980
R-factor0.18898
Rwork0.186
R-free0.25421
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)4cgp
RMSD bond length0.006
RMSD bond angle1.514
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.0002.030
High resolution limit [Å]1.9801.980
Rmerge0.0570.774
Number of reflections29640
<I/σ(I)>10.91.5
Completeness [%]100.0100
Redundancy5.83.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529130% PEG 1500, 0.2 M NACL, 0.1 M NA CACODYLATE, PH 5.5

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon