6Q4K
CDK2 in complex with FragLite38
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.897, 71.265, 72.062 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.720 - 1.060 |
R-factor | 0.14407 |
Rwork | 0.143 |
R-free | 0.16216 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hck |
RMSD bond length | 0.012 |
RMSD bond angle | 1.881 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.070 | 1.080 |
High resolution limit [Å] | 1.060 | 1.060 |
Rmerge | 0.026 | 0.560 |
Number of reflections | 105138 | 5230 |
<I/σ(I)> | 24.7 | 0.8 |
Completeness [%] | 84.3 | 5.5 |
Redundancy | 5.7 | 1.1 |
CC(1/2) | 0.990 | 0.610 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 293 | 10MG/ML CDK2 10% V/V PEG3350, 50 MM HEPES/NAOH, 50 MM NA/K PHOSPHATE, PH 7.5 |