6Q3A
Apo form of Apolipoprotein N-acyltransferase (Lnt)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-05 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 80.725, 80.725, 442.575 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.893 - 3.100 |
R-factor | 0.2523 |
Rwork | 0.251 |
R-free | 0.28650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5n6l |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.893 | 46.892 | 3.200 |
High resolution limit [Å] | 3.010 | 8.890 | 3.010 |
Rmerge | 0.199 | 0.044 | 6.094 |
Rmeas | 0.204 | 0.046 | 6.256 |
Number of reflections | 31865 | 1254 | 5091 |
<I/σ(I)> | 12.87 | 65.2 | 0.45 |
Completeness [%] | 99.6 | 98 | 98.9 |
Redundancy | 20.781 | 18.884 | 19.654 |
CC(1/2) | 0.999 | 0.999 | 0.161 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 7.2 | 277 | 36 % PEG200, 400 mM Ammonium phosphate dibasic, 100 mM HEPES |