6PYW
Crystal Structure of HLA-B*2705-W60A in complex with LRN, a self-peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-03-27 |
| Detector | ADSC QUANTUM 210 |
| Wavelength(s) | 0.954 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 50.962, 82.489, 110.024 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 20.200 - 1.380 |
| R-factor | 0.204 |
| Rwork | 0.204 |
| R-free | 0.22000 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4g9d |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.080 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.1) |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.3) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 36.670 | 36.670 | 1.400 |
| High resolution limit [Å] | 1.380 | 7.560 | 1.380 |
| Rmerge | 0.053 | 0.031 | 0.827 |
| Total number of observations | 770543 | 3681 | 32004 |
| Number of reflections | 95569 | 588 | 4403 |
| <I/σ(I)> | 20.7 | 48.3 | 2.4 |
| Completeness [%] | 99.5 | 87.3 | 93.9 |
| Redundancy | 8.1 | 6.3 | 7.3 |
| CC(1/2) | 0.999 | 0.997 | 0.789 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 277 | 20-30% PEG 4K, 0.2M Na Acetate and 0.1M Na Citrate pH 5.6 |






