6PWI
Structure of CpGH84D
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-02-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97910 |
Spacegroup name | P 65 |
Unit cell lengths | 195.723, 195.723, 106.467 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.920 - 2.650 |
R-factor | 0.1729 |
Rwork | 0.171 |
R-free | 0.20830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2v5c |
RMSD bond length | 0.003 |
RMSD bond angle | 1.036 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.920 | 2.710 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.095 | 0.477 |
Rpim | 0.062 | 0.324 |
Number of reflections | 66655 | 4477 |
<I/σ(I)> | 14.3 | 3.5 |
Completeness [%] | 98.8 | 99.3 |
Redundancy | 5.7 | 5.6 |
CC(1/2) | 0.995 | 0.778 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 291 | 25% PEG4000, 0.2 M (NH4)2SO4 and 0.1 M sodium citrate:HCl |