6PW1
Cytochrome c Oxidase delta 16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-08 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 123.315, 130.000, 177.539 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.960 - 2.100 |
R-factor | 0.1804 |
Rwork | 0.180 |
R-free | 0.20360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gsm |
RMSD bond length | 0.008 |
RMSD bond angle | 1.308 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmerge | 0.066 | 0.031 | 0.599 |
Total number of observations | 1213258 | ||
Number of reflections | 165884 | 17206 | 15881 |
<I/σ(I)> | 12.2 | ||
Completeness [%] | 99.6 | 99.5 | 96.5 |
Redundancy | 7.3 | 7.3 | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.3 | 289 | 100 mM MES, pH 6.3, 26-30 % PEG-400 and 2.5 % heptanetriol, 16mM MgCl2, 0.65 mM CdCl2 and 0.013 % Dodecyl maltoside |