6PVD
Structure of human MAIT A-F7 TCR in complex with human MR1-NV18.1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9536 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 216.057, 70.112, 142.874 |
Unit cell angles | 90.00, 103.97, 90.00 |
Refinement procedure
Resolution | 53.490 - 2.140 |
R-factor | 0.1697 |
Rwork | 0.168 |
R-free | 0.19770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4l4t |
RMSD bond length | 0.003 |
RMSD bond angle | 0.617 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.490 | 2.216 |
High resolution limit [Å] | 2.140 | 2.140 |
Number of reflections | 113315 | 11169 |
<I/σ(I)> | 13.15 | |
Completeness [%] | 98.7 | |
Redundancy | 4.9 | |
CC(1/2) | 0.998 | 0.799 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | BTP (pH 6.0 - 6.5), PEG3350 and sodium acetate |