Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6PSG

Crystal Structure of Class D Beta-lactamase OXA-48 with Faropenem

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-07-29
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths59.555, 106.674, 96.261
Unit cell angles90.00, 104.19, 90.00
Refinement procedure
Resolution35.119 - 2.130
R-factor0.1727
Rwork0.171
R-free0.21980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3hbr
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.6.0)
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.170
High resolution limit [Å]2.1215.7802.130
Rmerge0.0780.0510.368
Rmeas0.0920.0610.448
Rpim0.0490.0320.252
Number of reflections6481133642928
<I/σ(I)>6.5
Completeness [%]98.899.490.9
Redundancy3.53.72.7
CC(1/2)0.9950.920
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62930.2 M Ammonium Acetate, 0.1 M Sodium Acetate pH 4.6, 30%(w/v) PEG-4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon