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6PH7

Crystal structure of bovine opsin with nerol bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]173
Detector technologyPIXEL
Collection date2016-10-22
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.033
Spacegroup nameH 3 2
Unit cell lengths243.137, 243.137, 108.427
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.256 - 2.902
R-factor0.2145
Rwork0.214
R-free0.22470
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.662
Data reduction softwareXDS
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.7302.912
High resolution limit [Å]2.9002.902
Rmerge0.0540.588
Rmeas0.060
Rpim0.0240.330
Number of reflections268991749
<I/σ(I)>20.62.9
Completeness [%]99.197.8
Redundancy5.96.6
CC(1/2)0.9990.861
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52933.1-3.3 ammonium sulfate, 0.1M sodium acetate buffer, pH 5.5

219869

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