6PDS
Vaccine-elicited NHP FP-targeting antibody 0PV-a.04 in complex with HIV fusion peptide (residue 512-519)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 69.857, 74.381, 187.198 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.452 - 1.893 |
R-factor | 0.1943 |
Rwork | 0.193 |
R-free | 0.22010 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3228) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.121 | 0.068 | 0.635 |
Rmeas | 0.136 | 0.075 | 0.724 |
Rpim | 0.061 | 0.032 | 0.341 |
Total number of observations | 316884 | ||
Number of reflections | 75448 | 3693 | 3762 |
<I/σ(I)> | 8.2 | ||
Completeness [%] | 96.3 | 87.2 | 97.3 |
Redundancy | 4.2 | 4.4 | 4.1 |
CC(1/2) | 0.993 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.17M (NH4)2SO4, 25.5% PEG 4000, 15% Glycerol |