6PDR
Vaccine-elicited murine FP-targeting antibody vFP25.18 in complex with HIV fusion peptide (residue 512-519)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-11-01 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 128.124, 51.189, 75.258 |
| Unit cell angles | 90.00, 114.47, 90.00 |
Refinement procedure
| Resolution | 34.250 - 1.555 |
| R-factor | 0.176 |
| Rwork | 0.175 |
| R-free | 0.19970 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.810 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.610 |
| High resolution limit [Å] | 1.580 | 4.290 | 1.580 |
| Rmerge | 0.073 | 0.055 | 0.462 |
| Rmeas | 0.087 | 0.067 | 0.573 |
| Rpim | 0.047 | 0.037 | 0.334 |
| Total number of observations | 214926 | ||
| Number of reflections | 61868 | 3164 | 2921 |
| <I/σ(I)> | 9.5 | ||
| Completeness [%] | 98.6 | 97 | 94.8 |
| Redundancy | 3.5 | 3.2 | 2.6 |
| CC(1/2) | 0.991 | 0.708 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M Tris pH 8.0, 28% PEG 4000 |






