Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6PD1

PntC-AEPT: fusion protein of phosphonate-specific cytidylyltransferase and 2-aminoethylphosphonate (AEP) transaminase from Treponema denticola

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-03-13
DetectorADSC QUANTUM 210
Wavelength(s)1.0000
Spacegroup nameP 1 21 1
Unit cell lengths89.053, 129.012, 135.797
Unit cell angles90.00, 92.99, 90.00
Refinement procedure
Resolution38.000 - 2.720
R-factor0.2006
Rwork0.199
R-free0.23290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1jyk 1vjo
RMSD bond length0.005
RMSD bond angle0.948
Data reduction softwarexia2
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.0002.770
High resolution limit [Å]2.7202.720
Number of reflections823444114
<I/σ(I)>13
Completeness [%]99.8
Redundancy4.2
CC(1/2)0.996
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52930.01 M nickel II chloride hexahydrate, 0.1 M Tris-HCl, pH 8.5, 1.0 M lithium sulfate monohydrate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon