6PCP
Mechanism for regulation of DNA binding of Bordetella bronchiseptica BpsR by 6-hydroxynicotinic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-30 |
Detector | DECTRIS PILATUS3 R 100K-A |
Wavelength(s) | 1.54 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 77.543, 110.571, 273.331 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.086 - 3.200 |
R-factor | 0.2221 |
Rwork | 0.216 |
R-free | 0.26900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6pco |
RMSD bond length | 0.003 |
RMSD bond angle | 0.662 |
Data reduction software | HKL-3000 (717.1) |
Data scaling software | HKL-3000 (717.1) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.086 | 3.310 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.124 | 0.185 |
Rmeas | 0.134 | 0.210 |
Rpim | 0.049 | 0.097 |
Number of reflections | 18178 | 1564 |
<I/σ(I)> | 15.18 | 5.71 |
Completeness [%] | 90.8 | 79.39 |
Redundancy | 6.4 | 4 |
CC(1/2) | 0.989 | 0.966 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 285 | 0.1 M HEPES (pH 7.5), 2 mM 6-HNA, 0.2 M MgCl2, 18.5 % PEG 3350 |