6P8K
Escherichia coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 207.852, 207.852, 142.657 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.960 - 1.700 |
R-factor | 0.1916 |
Rwork | 0.192 |
R-free | 0.21750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2y3q |
RMSD bond length | 0.010 |
RMSD bond angle | 2.007 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.960 | 1.790 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.172 | 3.560 |
Rmeas | 0.178 | 3.710 |
Rpim | 0.048 | 1.039 |
Number of reflections | 337873 | 48968 |
<I/σ(I)> | 11.3 | 0.7 |
Completeness [%] | 99.9 | 100 |
Redundancy | 13.5 | 12.6 |
CC(1/2) | 1.000 | 0.480 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 295 | 2.4 M sodium malonate, pH 6.0 |