6P8J
Structure of P. aeruginosa ATCC27853 CdnD D62N/D64N mutant bound to ATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.484, 152.166, 88.255 |
Unit cell angles | 90.00, 90.12, 90.00 |
Refinement procedure
Resolution | 88.260 - 1.470 |
R-factor | 0.197 |
Rwork | 0.195 |
R-free | 0.22900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6p82 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.116 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 1.560 |
High resolution limit [Å] | 1.470 | 1.470 |
Rmerge | 0.088 | 0.948 |
Rmeas | 0.104 | 1.143 |
Number of reflections | 201994 | 31103 |
<I/σ(I)> | 9.7 | 0.97 |
Completeness [%] | 97.4 | 92.7 |
Redundancy | 3.4 | 3.1 |
CC(1/2) | 0.996 | 0.356 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1 M Tris pH 8.5, 0.2 M sodium formate, and 20-22% PEG 6000 |