6P5W
Structure of DCN1 bound to 3-methyl-N-((4S,5S)-3-methyl-6-oxo-1-phenyl-4-(p-tolyl)-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)benzamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97857 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 34.710, 95.567, 58.989 |
Unit cell angles | 90.00, 106.03, 90.00 |
Refinement procedure
Resolution | 33.011 - 1.690 |
R-factor | 0.1779 |
Rwork | 0.176 |
R-free | 0.22170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v86 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.750 |
High resolution limit [Å] | 1.690 | 3.640 | 1.690 |
Rmerge | 0.083 | 0.084 | 0.184 |
Rmeas | 0.101 | 0.102 | 0.228 |
Rpim | 0.057 | 0.057 | 0.133 |
Total number of observations | 123063 | ||
Number of reflections | 40350 | 4143 | 3882 |
<I/σ(I)> | 28.1 | ||
Completeness [%] | 97.7 | 98.5 | 94.8 |
Redundancy | 3 | 3.1 | 2.5 |
CC(1/2) | 0.961 | 0.931 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 6% PEG3350, 0.2M NH4Br |