6ORI
Enterococcal surface protein, partial N-terminal region
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 1 |
Unit cell lengths | 39.850, 49.960, 51.240 |
Unit cell angles | 107.36, 111.42, 90.43 |
Refinement procedure
Resolution | 47.270 - 1.400 |
R-factor | 0.1531 |
Rwork | 0.152 |
R-free | 0.17380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Crystals with selenomethionine previously determined by our lab but unpublished |
RMSD bond length | 0.009 |
RMSD bond angle | 1.240 |
Data reduction software | MOSFLM (1.9_1692) |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.270 | 1.420 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.066 | |
Number of reflections | 58580 | 410 |
<I/σ(I)> | 15.1 | |
Completeness [%] | 85.4 | 78.8 |
Redundancy | 3.17 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 295 | Crystallization condition: protein: 7.5 mg/mL in 10 mM Tris and 10 mM NaCl Mother liquid: 0.2 M ammonium acetate, pH 7.0, 16% PEG3350, 1 uL mother liquid + 1 uL protein The crystal was soaked in 8.625%(w/v) sodium acrylate, 2.5%(w/v) acrylamide and 0.2%(w/v) bis-acrylamide in mother liquid (0.2 M ammonium acetate, pH 7.0, 16% PEG 3350). after soaking for over 48 hours, the crystal was transferred to 1% APS and 1% TEMED in mother liquid (0.2 M ammonium acetate, pH 7.0, 16% PEG 3350). after 10 min, calcium chloride was added to the crystal with a final concentration of 100 mM. |