6OPF
Crystal structure of dmNxf2 UBA domain fused with Panoramix helix
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-11 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.890, 72.890, 59.680 |
Unit cell angles | 90.00, 109.90, 90.00 |
Refinement procedure
Resolution | 42.981 - 2.000 |
R-factor | 0.2207 |
Rwork | 0.220 |
R-free | 0.24610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1oai |
RMSD bond length | 0.007 |
RMSD bond angle | 0.809 |
Data reduction software | iMOSFLM |
Data scaling software | pointless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.13_2998)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.030 | 2.110 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.082 | 0.492 |
Number of reflections | 24962 | 3660 |
<I/σ(I)> | 10.1 | 2.7 |
Completeness [%] | 95.7 | 97.2 |
Redundancy | 5.4 | 5.3 |
CC(1/2) | 0.998 | 0.946 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.095 M Sodium citrate pH 5.6, 19% (v/v) Isopropanol, 19% (w/v) PEG 4000, 5% (v/v) Glycerol |