6OJA
Crystal structure of the N. meningitides methionine-binding protein in its L-methionine bound conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-27 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 |
Unit cell lengths | 79.580, 87.650, 91.626 |
Unit cell angles | 114.70, 104.41, 105.24 |
Refinement procedure
Resolution | 34.201 - 1.550 |
R-factor | 0.1632 |
Rwork | 0.162 |
R-free | 0.18140 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.931 |
Data reduction software | TRUNCATE |
Data scaling software | Aimless |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 34.201 | 34.201 | 1.590 |
High resolution limit [Å] | 1.550 | 6.920 | 1.550 |
Rmerge | 0.044 | 0.021 | 0.936 |
Rmeas | 0.047 | 0.022 | 1.018 |
Number of reflections | 277550 | 3187 | 20075 |
<I/σ(I)> | 19.84 | 59.43 | 1.81 |
Completeness [%] | 95.7 | 97.3 | 93.4 |
Redundancy | 7.042 | 7.516 | 6.545 |
CC(1/2) | 1.000 | 1.000 | 0.751 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 298 | 2.3M (NH4)2SO4, 0.1M sodium acetate pH 5 |