6OGB
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), H148D; circular permutant (50-51)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.810, 68.690, 61.640 |
Unit cell angles | 90.00, 99.76, 90.00 |
Refinement procedure
Resolution | 36.182 - 1.650 |
R-factor | 0.157 |
Rwork | 0.156 |
R-free | 0.17760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zf3 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.870 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.182 | 1.709 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.080 | 0.956 |
Rmeas | 0.087 | 1.057 |
Rpim | 0.036 | 0.443 |
Number of reflections | 50444 | 4904 |
<I/σ(I)> | 13.08 | 1.61 |
Completeness [%] | 98.3 | 95.58 |
Redundancy | 5.7 | 5.5 |
CC(1/2) | 0.999 | 0.656 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 295 | 50 mM sodium acetate, pH 5.0, 100 mM NaCl, 7-8% PEG 3350 |